Modeling the Transition between Localized and Extended Deposition in Flow Networks through Packings of Glass Beads Gess Kelly1 Navid Bizmark34 Bulbul Chakraborty1 Sujit S. Datta3 and Thomas G. Fai2

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Modeling the Transition between Localized and Extended Deposition in Flow
Networks through Packings of Glass Beads
Gess Kelly1, Navid Bizmark3,4, Bulbul Chakraborty1, Sujit S. Datta3, and Thomas G. Fai2
1Martin A. Fisher School of Physics, Brandeis University, Waltham, MA 02453
2Mathematics Department & Volen Center for Complex Systems, Brandeis University, Waltham, MA 02453
3Department of Chemical and Biological Engineering,
Princeton University, Princeton, NJ 08544, USA and
4Princeton Materials Institute, Princeton University, Princeton, NJ 08540, USA
(Dated: March 28, 2023)
We use a theoretical model to explore how fluid dynamics, in particular, the pressure gradient and
wall shear stress in a channel, affect the deposition of particles flowing in a microfluidic network.
Experiments on transport of colloidal particles in pressure-driven systems of packed beads have
shown that at lower pressure drop, particles deposit locally at the inlet, while at higher pressure
drop, they deposit uniformly along the direction of flow. We develop a mathematical model and use
agent-based simulations to capture these essential qualitative features observed in experiments. We
explore the deposition profile over a two-dimensional phase diagram defined in terms of the pressure
and shear stress threshold, and show that two distinct phases exist. We explain this apparent phase
transition by drawing an analogy to simple one-dimensional models of aggregation in which the
phase transition is calculated analytically.
I. INTRODUCTION
Deposition and aggregation of fine particles in mi-
crofluidic networks and porous media play an impor-
tant role in various natural and industrial processes
such as water purification, geotextile filtration, appli-
cations in precision drug delivery and similar biomed-
ical tasks, transport of microplastics, environmental
cleanups, groundwater pollutant removal, oil recovery,
and transport of nanomaterials for groundwater aquifer
remediation [1–7] [8–11]. For example, in filtration pro-
cesses, understanding of the deposition dynamics of col-
loidal particles plays a significant role in improving filter
efficiency via reducing filter fouling [12–14]. Observa-
tions from [15] indicate that, regardless of the charge of
the colloidal particles flowing in the bead network, apply-
ing lower pressures across the system leads to localized
deposition under various conditions. This may suggest
that irrespective of the exact local clogging mechanism
(e.g., bridging versus aggregation [16]), the interplay of
hydrodynamical variables in these systems controls the
resulting deposition profile. We focus on the role of ap-
plied pressure difference ∆Pas one of the key variables
motivated by the experimental design in [15] and the wall
shear stress τw, which has been shown in past studies
to play an important role in erosion [17–19]. Here, the
shear stress at the wall τwrefers to the shear stress ex-
perienced by colloidal particles deposited on the walls of
the packing. We follow the approach of [19] to capture
the role of the shear stress threshold τ, a material pa-
rameter that describes the threshold shear stress at the
wall above which fluid flow erodes the deposited particles
from the walls. Table S1 in the Supplementary Material
tfai@brandeis.edu
contains representative parameter values. Throughout
the text, we use a hat notation, e.g., ∆ ˆ
P, to denote the
corresponding variables, e.g., P, that are normalized
by a set value relevant to the experimental system. Ta-
ble S2 in the Supplementary Material contains additional
details.
Our specific system of interest is motivated by recent
experiments from [15], in which a constant pressure dif-
ference ∆Papplied to a packing of disordered glass beads
of length Ldrives a fluid flow containing a suspension of
colloidal particles. These experiments show that at larger
pressure differences, the profile of particles deposited on
the solid matrix extends uniformly along the length of the
packing, while at lower pressures, the particles deposit lo-
cally at the inlet where they are injected into the system.
Here, we develop a mathematical model to explain how
the pressure difference influences the deposition profile.
Past studies of simple mass-aggregation models [14, 21]
motivate us to explore the phase space of shear stress
threshold ˆτand pressure difference ∆ ˆ
P. In particular,
Majumdar et al. [21] consider minimal systems and lat-
tice models in which discrete masses diffuse at a constant
unit rate, which normalizes the overall timescale. Multi-
ple masses may aggregate at lattice sites after diffusion,
and units of masses erode (chip away) from blocks at
a constant chipping rate w. Physically, chipping corre-
sponds to single-particle dissociation in processes such as
polymerization and competes with coalescence. In this
simplest case, they work with two independent variables,
the chipping rate wand mass density ρ, that remain con-
stant and determine the behavior of the system at steady
state. They explore the phase space consisting of the
mass density ρand chipping rate wand show that these
finite systems exhibit two distinct phases at steady state,
only one of which involves an infinite aggregate. One im-
portant difference between the simple mass-aggregation
model and our study is the fixed density or constant to-
arXiv:2210.01780v2 [cond-mat.soft] 26 Mar 2023
2
FIG. 1. We use a network approach to model the bead packing
here shown in the absence of particles. (a) We skeletonize
the image of the packing, and then generate a network. The
edges of the network represent the channels through which
fluid may flow in the packing and the nodes represent the
junctions where these channels meet. (b) We obtain the flow
rates in the channels by applying the Kirchhoff’s laws [20].
(c) Zoomed-out view showing the network as a whole. The
color in (b) and (c) shows the magnitude of the channel flow
rates in SI units (m3/s). (a) and (b) have the same scale bar.
The grey background shows the experimental micrograph of
the beads.
tal mass with periodic boundary conditions in contrast
to our model where there is a flux of particles into and
out of the system.
We formulate the fluid flow through the packings by
applying the hydraulic analogy to the network of channels
extracted from the bead packing images. Using our net-
work model and deposition and erosion laws, we demon-
strate a similar transition in the normalized shear stress
threshold ˆτand pressure ∆ ˆ
Pphase space. Motivated by
these simple models of aggregation and fragmentation ex-
plored in previous studies [21, 22], we explore the model
phase space spanned by two dimensionless parameters,
and identify a transition between extended and localized
deposition regimes in terms of the key parameters of pres-
sure difference and shear stress threshold [23].
II. METHODS
We use a graph- or network-based approach [24, 25]
to model the porous network created by the beads as
shown in FIG. 1(a). The idea of modeling a porous sys-
tem as a network has been studied previously [26–28].
For instance, past studies have demonstrated the effec-
tiveness of a network-based approach by highlighting the
role of disorder on the flow distribution in porous media
[29]. We use images of two-dimensional (2D) slices of
the three-dimensional (3D) packing. We then generate
the model network based on these images. Because of
the expected differences between the flow in 2D and 3D,
we do not expect to quantitatively recover all aspects of
the experiments. In such network models, each pore or
channel is typically represented by an edge in a network
representing the entire porous system (see FIG. 1.(a)).
Each edge may be weighted in terms of its conductance
and the nodes of the network represent junctions between
the edges. Assuming we have an incompressible fluid, the
inflow and outflow of particles and fluid must be equal
to respect mass conservation. In our system of interest,
boundary junctions at the inlet and outlet are subject to
two pressures held constant for the duration of the ex-
periment. To solve for the resulting channel flow rates,
as shown in FIG. 1 (b) and (c), we apply Kirchhoff’s
circuit laws. For each channel, we estimate the channel
length land diameter dfrom the image of the network to
calculate the channel conductance g, which is defined as
the proportionality constant between the volumetric flow
rate through a given channel and the pressure difference
across the channel given by the Hagen-Poiseuille law [20]:
g=πd4
128ηl ,(1)
where ηis the dynamic viscosity. The resolution of the
image in FIG. 1 tends to be lower along the boundaries
and our image processing does not accurately identify a
significant portion of the channels. We use the largest
connected component of the model network, which is in
the interior of the packing. For this reason we neglect
the upper and lower boundaries. More details regard-
ing channel flow rate calculations can be found in the
Supplementary Material. The total flow rate is of order
1010 m3/s once we account for the depth of the three-
dimensional system.
To capture the stochastic effects, we use agent-based
modeling to model the particles as they deposit and erode
within the network. This distinguishes our study from a
closely related previous model of erosion in networks in
which differential equations are used to predict how ero-
sion changes the width of the channels in the network
[28]. Another difference is our assumption that the glass
beads that form the network remain fixed over the course
of the simulation. Consequently, while the deposited par-
ticles may erode in our simulation, the channels them-
selves do not erode. Because initially the channel does
not contain any deposited particles, and since erosion
only occurs through removal of particles, the channel
width cannot grow beyond its initial value.
Particles enter the system from the inlet at constant
time intervals. This is a discrete approximation to the
experiments, in which the particles are injected continu-
ously at a constant volume fraction. This is also differ-
ent from the conserved-mass aggregation models of [21]
where the density is constant. As particles deposit in the
network during the simulations, they cause a decrease in
the width of the channels, which may eventually lead to
topological changes when the number of deposited par-
ticles surpasses the channel capacity, i.e., clogging. We
assume that each time a particle is deposited (eroded),
摘要:

ModelingtheTransitionbetweenLocalizedandExtendedDepositioninFlowNetworksthroughPackingsofGlassBeadsGessKelly1,NavidBizmark3;4,BulbulChakraborty1,SujitS.Datta3,andThomasG.Fai21MartinA.FisherSchoolofPhysics,BrandeisUniversity,Waltham,MA024532MathematicsDepartment&VolenCenterforComplexSystems,Brandeis...

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