Monitoring Public Behavior During a Pandemic Using Surveys Proof-of-Concept Via Epidemic Modelling

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Monitoring Public Behavior During a
Pandemic Using Surveys: Proof-of-Concept
Via Epidemic Modelling
Andreas Koher1, Frederik Jørgensen2, Michael Bang
Petersen2and Sune Lehmann1,3*
1DTU Compute, Technical University of Denmark.
2Department of Political Science, Aarhus University.
3Center for Social Data Science, University of Copenhagen.
*Corresponding author(s). E-mail(s): sljo@dtu.dk;
Abstract
Implementing a lockdown for disease mitigation is a balancing act:
Non-pharmaceutical interventions can reduce disease transmission signif-
icantly, but interventions also have considerable societal costs. Therefore,
decision-makers need near real-time information to calibrate the level
of restrictions. We fielded daily surveys in Denmark during the sec-
ond wave of the COVID-19 pandemic to monitor public response to
the announced lockdown. A key question asked respondents to state
their number of close contacts within the past 24 hours. Here, we estab-
lish a link between survey data, mobility data, and hospitalizations
via epidemic modelling. Using Bayesian analysis, we then evaluate the
usefulness of survey responses as a tool to monitor the effects of lock-
down and then compare the predictive performance to that of mobility
data. We find that, unlike mobility, self-reported contacts decreased
significantly in all regions before the nation-wide implementation of
non-pharmaceutical interventions and improved predicting future hos-
pitalizations compared to mobility data. A detailed analysis of contact
types indicates that contact with friends and strangers outperforms con-
tact with colleagues and family members (outside the household) on the
same prediction task. Representative surveys thus qualify as a reliable,
non-privacy invasive monitoring tool to track the implementation of non-
pharmaceutical interventions and study potential transmission paths.
Keywords: Epidemic monitoring, Mobility data, Survey data, Epidemic
modelling
1
arXiv:2210.01472v2 [physics.data-an] 31 Jan 2023
21 INTRODUCTION
1 Introduction
Pandemic management is a balancing act. When an outbreak of infections
flares up, governments and authorities need to impose restrictions and recom-
mendations on society that are carefully calibrated to the situation. On the
one hand, during the COVID-19 pandemic, such non-pharmaceutical interven-
tions have considerable benefits by changing the dominant transmission route
– close contacts between individuals – via the incentives and information they
provide [1,2]. On the other hand, these interventions have considerable costs
in the form of negative externalities relating to the economy and mental health
[35].
This balancing act puts authorities and governments in need of informa-
tion to continuously calibrate the level of restrictions. It is not a matter of
simply sending out a single set of instructions regarding restrictions and rec-
ommendations. Rather, authorities need to continuously receive information
about the effectiveness of those restrictions and recommendations and adjust
accordingly. An obvious source of information is directly related to the epi-
demic and includes the number of infection cases, hospitalizations, and deaths.
Yet cases of infection are difficult to monitor and, for example, changes in the
public’s motivation to participate in testing programs may create problems
with respect to comparisons over time [6]. Furthermore, there is a significant
lag between the onset of interventions and hospitalizations and death counts,
which imply that it is difficult to calibrate interventions on the basis of such
information. Consequently, researchers, authorities and governments world-
wide have complemented epidemiological information with information on the
direct target of the interventions: Behaviour [7,8].
In this manuscript, we assess the predictive performance of a particular
source of information about behavior during lockdowns: Population-based sur-
veys on social contacts, fielded daily to representative samples of the Danish
population during the COVID-19 pandemic (see Methods for details on this
dataset). This assessment aligns with recommendations about the use of sur-
veys as epidemic monitoring tools on the basis of experiences during the SARS
epidemic in Hong Kong [9] and recommendations from the World Health Orga-
nization during the COVID-19 pandemic [10]. From a public health policy
perspective, this particular dataset is a unique test case as it was, in fact,
reported to the Danish government for this purpose on a twice-weekly basis
during the second wave of COVID-19 infections in December 2020.
Furthermore, these data are unique in another respect: They constitute an
open and ‘citizen science’ [11] alternative to the most used source of informa-
tion on pandemic behavior: Mobility data. As we detail below, mobility data
as a source of information may be problematic from both a methodological and
policy perspective. Mobility data provides a proxy for close contacts between
people and has been heavily utilized by researchers and public health institu-
tions [8,1214]. Mobility data quantifies the population’s movement patterns
and is unobtrusively obtained in a number of ways, for example, via people’s
3
2020-12-01 2020-12-15 2021-01-01 2021-01-15 2021-02-01 2021-02-15
0.6
0.9
1.2
1.5
1.8
Reproduction Number Rt
lockdown announced
partial lockdown
full lockdown
95% CI
median
2020-12-01 2020-12-15 2021-01-01 2021-01-15 2021-02-01 2021-02-15
60
40
20
0
relative change [%]
Self-Reported Survey Data
40th %tile (3 contacts)
50th %tile (5 contacts)
60th %tile (7 contacts)
70th %tile (10 contacts)
80th %tile (15 contacts)
90th %tile (25 contacts)
2020-12-01 2020-12-15 2021-01-01 2021-01-15 2021-02-01 2021-02-15
60
40
20
0
relative change [%]
Mobility
Self-Reported Survey Data
Google Mobility Data
Apple Mobility Data
Telco Mobility Data
Fig. 1 Panel A: inferred reproduction number from national hospitalizations. Panel B:
Comparison between thresholds that define risk-taking behaviour: The percentile gives a
number of contacts nthat defines risk-taking behaviour. The time-series present the daily
fraction of individuals P(#total contacts n) that report at least ncontacts. Panel C:
Comparison between risk-taking behaviour with a threshold at the 70th percentile (self-
reported survey data), Google mobility, Apple mobility, and telecommunication data (Telco).
smart phones and provided to researchers and governments via private compa-
nies such as Google [15]. This reliance, however, can and has raised concerns.
First, in many cases, it implies that pandemic management and research relies
on the willingness of private companies to share information during a critical
crisis. Second, citizens themselves may be concerned about real or perceived
privacy issues related to the sharing of data with authorities [16,17]. Given
the importance of public trust for successful pandemic management [18], such
concerns – if widespread – can complicate pandemic control. Third, data from
companies such as Google, Facebook and local phone companies may not be
representative of the population of interest: The entire population of the coun-
try. Rather than being invited on the basis of traditional sampling methods,
people opt-in to the services of different companies and, hence, the data from
any single company is likely a biased sample. Fourth, the movements of peo-
ple in society as captured by mobility data is only a proxy of the quantity of
interest: Actual close encounters between individuals that drive the pandemic.
For these reasons, it is key to assess alternative sources of information
about public behavior such as nationally representative surveys of the adult
population. In principle, surveys could alleviate the problems relating to the
collection and validity of mobility data. Survey research is a centuries old
41 INTRODUCTION
low-cost methodology that can be utilized by public actors and that relies on
well-established procedures for obtaining representative information on private
behaviours in voluntary and anonymous ways [19].
At the same time, data from surveys come with their own methodological
complications. As documented by decades of research, people may not accu-
rately report on their own behaviour [20]. Survey answers during the pandemic
may be biased by, for example, self-presentational concerns and inaccurate
memory. While research on survey reports of behaviour during the pandemic
suggests that self-presentational concerns may not affect survey estimates [21],
memory biases may (although such biases are likely small for salient social
behavior) [22]. Even with such biases, however, surveys may be fully capable
to serve as an informative monitoring tool. The key quantity to monitor is
change in aggregate behaviour over time. If reporting biases are randomly dis-
tributed within the population, aggregation will provide an unbiased estimate.
Even if this is not the case, changes in the survey data will still accurately
reflect changes in population behaviour as long as reporting biases are stable
within the relevant time period.
On this basis, the purpose of the present manuscript is, first, to examine
the degree to which survey data provide useful diagnostic information about
the trajectory of behavior during a lockdown and, second, to compare its use-
fulness to information arising from mobility data. To this end, we focus on
a narrow period around Denmark’s lockdown during the second wave of the
COVID-19 epidemic in the Fall of 2020, i.e., prior to vaccine roll-out when it
was crucial for authorities to closely monitor public behavior. We demonstrate
the usefulness of survey data on a narrow window of time because the chang-
ing nature of factors such as seasonal effects, new variants, vaccines, changing
masking efforts, etc., make it difficult to model COVID-19 transmission across
long periods without making a large number of assumptions [6]. See also Sec. 3
for a discussion on the limitations of our survey data. In spite of the limited
scope, we believe that the study remains relevant for policy makers because
it allows to monitor public behaviour at a crucial moment, when policy mak-
ers should not be forced to rely on proximity or mobility data from private
companies in the absence of timely incidence data.
Specifically, we ask whether a) daily representative surveys regarding the
number of close social contacts and b) mobility data allow us to track changes
in the observed number of hospitalizations in response to the lockdown.
In addition, to further probe the usefulness of survey data, we provide a
fine-grained analysis of how different types of social contacts relate to hospital-
izations. Our results shed new light on the usefulness of survey data. Previous
studies during the COVID-19 pandemic have documented high degrees of over-
lap between self-reported survey data on social behavior and mobility data,
but have not assessed whether these data sources contain useful information
for predicting transmission dynamics [23,24]. One study did compare the pre-
dictive power of mobility data to survey data on the psychosocial antecedents
of behavior [25] and found that mobility data was more predictive than the
5
survey data of COVID-19 transmission dynamics. Here, we provide a more
balanced test by comparing the predictive value of mobility data and survey
data when directly focused on self-reported behavior rather than simply its
psychosocial antecedents.
2 Results
We establish the link between survey data, mobility data, and hospitalizations
via state-of-the-art epidemic modeling, which uses the behavioural survey and
mobility data as an input to capture underlying infectious activity [26,27].
Specifically we extend the semi-mechanistic Bayesian model from Flaxman et
al. [27,28] to jointly model the epidemic spreading within the five regions of
Denmark. Where possible, we use partial pooling of parameters to share infor-
mation across regions and thus reduce region specific biases. We parametrize
the regional reproduction number Rtwith a single predictor Xtfrom our survey
or the mobility data, respectively, for each realization of a model:
log(Rt) = log(R0) + eXt(1)
The regional reproduction number at time tderives from the initial value R0
and the scaled predictor eXtwith a logarithmic link-function (see Methods for
full details on the model).
We compare the predictive performance of each data stream using leave-
one-out cross-validation (LOO). LOO works by fitting the model to the
observed hospitalizations excluding a single observation and comparing the
prediction of the unseen observation against the observed real-world data.
Repeating this process over all observations, allows one to estimate the model
performance on out-of-sample data with a theoretically principled method that
accounts for uncertainties [29]. In practice, this would result in an immense
computational effort and therefore, we use an efficient estimation of LOO
based on pareto-smoothed importance sampling [30]. In order to compare the
predictive performance of, say self-reported survey against mobility, we calcu-
late the LOO score for each model parametrization and consider the difference
significant if it exceeds the 95% CI.
Because we are interested in the use of behavioural data as a guide
for decision-making, our inference focuses on the key period of the second
wave from 1-December-2020, i.e., about one week before Denmark’s lockdown
announcement, to 20-February-2021 when vaccinations accelerated across the
country. The period captures a sharp increase and eventual decline in hos-
pitalizations during the second wave of Denmark’s Covid-19 pandemic (see
Supplementary Fig. S1).
摘要:

MonitoringPublicBehaviorDuringaPandemicUsingSurveys:Proof-of-ConceptViaEpidemicModellingAndreasKoher1,FrederikJrgensen2,MichaelBangPetersen2andSuneLehmann1,3*1DTUCompute,TechnicalUniversityofDenmark.2DepartmentofPoliticalScience,AarhusUniversity.3CenterforSocialDataScience,UniversityofCopenhagen.*C...

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