
Number-Resolved Detection of Dark Ions in Coulomb Crystals
Fabian Schmid,1, ∗Johannes Weitenberg,1Jorge Moreno,1
Theodor W. H¨ansch,1, 2 Thomas Udem,1, 2 and Akira Ozawa1, †
1Max-Planck-Institut f¨ur Quantenoptik, 85748 Garching, Germany
2Fakult¨at f¨ur Physik, Ludwig-Maximilians-Universit¨at M¨unchen, 80799 M¨unchen, Germany
(Dated: October 6, 2022)
While it is straightforward to count laser-cooled trapped ions by fluorescence imaging, detecting
the number of dark ions embedded and sympathetically cooled in a mixed ion crystal is more
challenging. We demonstrate a method to track the number of dark ions in real time with single-
particle sensitivity. This is achieved by observing discrete steps in the amount of fluorescence
emitted from the coolant ions while exciting secular motional resonances of dark ions. By counting
the number of fluorescence steps, we can identify the number of dark ions without calibration and
without relying on any physical model of the motional excitation. We demonstrate the scheme by
detecting H+
2and H+
3ions embedded in a Be+ion Coulomb crystal in a linear radio frequency trap.
Our method allows observing the generation and destruction of individual ions simultaneously for
different types of ions. Besides high-resolution spectroscopy of dark ions, another application is the
detection of chemical reactions in real time with single-particle sensitivity. This is demonstrated in
this work.
Trapped and laser-cooled ions have been used to in-
vestigate fundamental light-atom interactions [1–5], for
observation of ion-neutral chemical reactions [6–10], as
well as for optical frequency standards [11, 12] and quan-
tum computing [13–15].
Sympathetic cooling is a way for extending this tech-
nology to atomic or molecular ions that do not possess
suitable transitions for laser cooling. In this scheme, the
ions are trapped together with another ion species that
can be laser-cooled. Due to the mutual Coulomb inter-
action, the ions rapidly thermalize, indirectly cooling all
species. At sufficiently low temperatures, the ions form
regular Coulomb crystals in the trap [16]. The technique
has found application in precision spectroscopy of HD+
and H+
2molecular ions [17–21], optical atomic clocks
based on quantum logic spectroscopy of Al+[22, 23],
spectroscopy of highly-charged ions [24, 25], and the
study of chemical reactions with molecular ions [7, 26–
29].
While the number of laser-cooled ions can be eas-
ily measured by fluorescence imaging, identification and
counting of the non-fluorescing dark ions is more difficult.
One method is to eject the ions from the trap and to ac-
celerate them onto a detector in an electric field. The
different ion species can be distinguished by their arrival
times [30–33]. While this method allows a quantitative
measurement of the number of ions of each species, it
has the disadvantage that it is destructive and a new ion
crystal has to be prepared after each measurement.
In linear Paul traps, lighter ions are more tightly con-
fined than heavier ions. Lighter sympathetically cooled
ions therefore form a dark region in the center of the flu-
orescence image of an ion crystal consisting of a heavier
coolant species. The number of dark ions can then be
∗fabian.schmid@mpq.mpg.de
†akira.ozawa@mpq.mpg.de
obtained by comparing experimental images with simu-
lated ones [17, 34, 35]. This method is non-destructive,
and the ion images can be acquired quickly and post-
processed later. However, different dark ion species can-
not be distinguished.
Instead, secular excitation has been used for non-
destructive detection of trapped ions. In this method the
secular motion of the ions, i.e. the harmonic motion in the
time averaged trap potential, is excited resonantly by ap-
plying an additional oscillating electric field. This trans-
fers energy into the motion of the surrounding coolant
ions and thereby increases their temperature. Due to the
temperature dependence of the Doppler broadening this
leads to a change in the amount of fluorescence that can
be observed from the coolant ions. The secular motion of
the ions in three-dimensional Coulomb crystals has rich
dynamics that can complicate the analysis of the secular
excitation spectra. For example, the frequencies of the
secular resonances are influenced by space charge effects
and the mechanical coupling between the ions [36–38].
The energy transfer to the coolant ions is expected to in-
crease with an increasing number of dark ions. Therefore,
the fluorescence change induced by motional excitation
serves as a measure of the number of dark ions. However,
the relationship between the fluorescence change and the
number of excited dark ions is in general non-linear and
is influenced by various experimental parameters, such
as the strength of the motional excitation and the geom-
etry of the mixed ion crystal. Therefore, evaluating the
number of dark ions quantitatively is challenging and of-
ten requires intricate modeling and calibration of the sig-
nal using molecular dynamics simulations [26, 39]. This
problem has been limiting the usage of the secular exci-
tation method for highly precise spectroscopy so far.
In this work, we show that by properly choosing ex-
perimental parameters, discrete steps in the secular ex-
citation signal can be observed that are identified with
individual dark ions leaving the trap or being generated
arXiv:2210.02112v1 [physics.atom-ph] 5 Oct 2022