Physical limits to membrane curvature sensing by a single protein Indrajit Badvaram1and Brian A. Camley21 1Department of Biophysics Johns Hopkins University Baltimore MD

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Physical limits to membrane curvature sensing by a single protein
Indrajit Badvaram1and Brian A. Camley2, 1
1Department of Biophysics, Johns Hopkins University, Baltimore, MD
2William H. Miller III Department of Physics & Astronomy, Johns Hopkins University, Baltimore, MD
Membrane curvature sensing is essential for a diverse range of biological processes. Recent experiments have
revealed that a single nanometer-sized septin protein can distinguish between membrane-coated glass beads of
one micron and three micron diameters, even though the septin is orders of magnitude smaller than the beads.
This sensing ability is especially surprising since curvature-sensing proteins must deal with persistent thermal
fluctuations of the membrane, leading to discrepancies between the bead’s curvature and the local membrane
curvature sensed instantaneously by a protein. Using continuum models of fluctuating membranes, we investigate
whether it is feasible for a protein acting as a perfect observer of the membrane to sense micron-scale curvature
either by measuring local membrane curvature or by using bilayer lipid densities as a proxy. To do this, we
develop algorithms to simulate lipid density and membrane shape fluctuations. We derive physical limits to
the sensing efficacy of a protein in terms of protein size, membrane thickness, membrane bending modulus,
membrane-substrate adhesion strength, and bead size. To explain the experimental protein-bead association
rates, we develop two classes of predictive models: i) for proteins that maximally associate to a preferred
curvature, and ii) for proteins with enhanced association rates above a threshold curvature. We find that the
experimentally observed sensing efficacy is close to the theoretical sensing limits imposed on a septin-sized
protein, and that the variance in membrane curvature fluctuations sensed by a protein determines how sharply
the association rate depends on the curvature of the bead.
I. INTRODUCTION
Membrane curvature is ubiquitous throughout cell biology
[13]: proteins that sense membrane curvatures can help lo-
cate the axis of cell division, determine cell polarity, facilitate
membrane remodeling, and serve as a cue for intracellular sig-
naling [48]. These proteins often act in tandem by binding
with each other to sense curvature cooperatively. However,
in the case of septin proteins, recent experiments have shown
that in addition to sensing curvatures via cooperative filament
formation [9,10], even a single septin protein can distinguish
between micron-scale membrane curvatures and preferentially
bind to membranes adhered to glass beads of different curva-
tures with different association rates [1113]. How do proteins
only a few nanometers in size effectively sense membrane cur-
vatures that are hundreds of times larger than themselves, on
the order of micrometers? This sensing ability is even more
remarkable considering that biological membranes undergo
persistent thermally-driven undulations [14]. Even if a pro-
tein could perfectly measure the instantaneous shape of the
membrane at the nanometer scale, these undulations drive the
membrane away from its average shape, confounding the pro-
teins attempts to measure the membranes curvature. How
can a protein reliably make a measurement of micron-scale
curvature in this noisy environment?
Curvatures also induce deviations in the packing of lipids in
the membrane bilayer, and proteins with amphipathic helices
insert themselves into bilayers [15,16]. Proteins that sense
micron-scale curvature may then be, instead of measuring the
shape directly, using a proxy for local curvature related to lipid
packing to sense membrane shape [17]. We conjecture that one
such proxy might be the deviations in lipid densities between
the upper and lower monolayers of the membrane bilayer.
Although there are descriptions of molecular mechanisms
employed by proteins when sensing nanometer-scale curva-
tures [18], curvature sensing at the micron-scale is less well-
average membrane shape
(μm-scale)
protein
(nm-scale)
instantaneous
local membrane shape
(nm-scale)
FIG. 1. Thermal fluctuations of the membrane lead to discrepancies
between the instantaneous local membrane shape present at the pro-
teins location and the average membrane shape. Even if the protein
were a perfect detector of curvatures, observing the local curvature
without error, the local shape may not be indicative of the overall
membrane shape. A nanometer-sized protein is challenged by relative
differences in scale: steep local undulations have radii of curvature
on the scale of nanometers, while the membrane on average may be
much flatter, with a radius of curvature on the scale of micrometers
(not to scale in this illustration).
understood [19]. Previous theoretical studies have modeled
the thermodynamics of curvature sensing [20] and the effects
of helix insertion on the membrane’s energy [21,22]. Here,
we take a different approach: we ask how precisely a protein
could measure the micron-scale curvature of a membrane if it
made a perfect measurement of local membrane shape or local
lipid density, subject to the inevitable thermal fluctuations of
the membrane. This gives us the fundamental physical limits
to curvature sensing for an idealized protein, akin to Berg and
Purcell’s classic work on the limits of ligand concentration
sensing for a perfect detector of a finite size [23] and later
follow-ups [2427]. Our result builds on the larger literature
of sensing limits in different contexts, including gradient sens-
arXiv:2210.12204v1 [physics.bio-ph] 21 Oct 2022
2
ing [2832], flow sensing [33], and sensing the mechanical
properties of heterogeneous materials [34,35]. To quantify
curvature sensing in this way, we define a signal-to-noise ratio
(SNR) to indicate how well a protein is able to extract useful
information about the membrane’s shape despite stochasticity.
To support our analytical models, we develop algorithms to
simulate membranes whose fluctuations in height are coupled
to fluctuations in bilayer lipid densities.
Motivated by the experiments in [12,13], we explore the
theoretical limits to a proteins ability to distinguish between
membrane-adhered beads of different sizes. For a bead of ra-
dius 𝑅, the mean membrane curvature on average is 𝐶=1
𝑅.
However, if we probe the membrane over a region of a pro-
tein size 𝑎, the curvature will differ from this value (Fig. 1).
We derive that in the absence of membrane-substrate adhe-
sion, the curvature fluctuations sensed by a protein of size
𝑎and membrane bending modulus 𝜅are h𝐶2
𝑎i=1
𝑎𝑘𝐵𝑇
16𝜋𝜅 .
Since 𝑎𝑅and 𝑘𝐵𝑇
𝜅1/20, the magnitude of these curva-
ture fluctuations is very large relative to the average curvature
1/𝑅—so even with a perfect measurement, a protein could
observe values of curvature far from 1/𝑅, indicating the dif-
ficulty in curvature sensing on a freely fluctuating membrane.
Including membrane-bead adhesion suppresses these fluctua-
tions, amplifying the protein’s ability to distinguish between
micron-sized beads. We also study the signal-to-noise ratio as-
sociated with measuring changes in lipid density, and find that
measuring lipid densities compares well to an ideal curvature
measurement when the protein is small, or when the mem-
brane is thick and resistant to in-plane compression. Lastly,
to explain the experimentally observed protein-bead associa-
tion rates, we show how fluctuation variances like h𝐶2
𝑎iand
sensing SNR can determine the association rate of a protein to
membrane-adhered beads of different curvatures. To do so, we
develop two classes of models: the preferred curvature model,
for proteins that associate maximally to a specific membrane
curvature, and the curvature threshold model, for proteins that
exhibit enhanced binding to all curvatures above a thresh-
old. Using the preferred curvature model for our estimates
of membrane-substrate adhesion, we find that measurements
of curvature by a single septin protein are close to the funda-
mental limit of sensing accuracy. With the curvature threshold
model, we show that the sharpness in the transition to enhanced
association above a threshold is determined by the variance in
membrane curvature fluctuations sensed by the protein.
II. MODELS AND SIMULATION METHODS
A. Modeling membrane, bead, and membrane-bead adhesion
We represent the shape of the membrane in terms of its
height (r)above a two-dimensional plane as a function of
position r=(𝑥, 𝑦), i.e. using Monge gauge [36]. To induce a
curvature similar to the bead of [12,13], we model a substrate
with a spherical bump on a flat surface (Fig. 2). We assume
that the adhesion energy between the bead and membrane
FIG. 2. Snapshots of thermally-fluctuating simulated membranes: i)
(left) a freely fluctuating flat membrane with no membrane-substrate
adhesion, and ii) (right) a membrane adhered to a bead of radius
𝑅=500 nm with adhesion strength 𝛾=1013 J/m4. System size is
𝐿= 1.6 𝜇m. Note that due to the large difference in size scales and
strong membrane-substrate adhesion, fluctuations are not apparent in
the plot on the right. Simulation parameters: Table I.
arises from a harmonic potential,
𝐸adh =𝛾
2dr((r) − bead (r))2,(1)
where 𝛾is the strength of membrane-substrate adhesion in
units of J/m4,bead (r)traces the height of the bead at each
position in the 𝑥𝑦 plane and serves as the equilibrium height,
and the integral dris over the 𝑥𝑦 plane. This harmonic
potential approximates more detailed potentials, e.g. the Mie
potential of [37] or van der Waals interactions [38]; see Ap-
pendix G. The height field bead (r)corresponds to the 𝑧-axis
height of a hemisphere of radius 𝑅, centered in the plane, i.e.
bead (r)=𝑅22𝑠2+2𝑠(𝑥+𝑦) 𝑥2𝑦2with 𝑠=𝐿/2for
rwithin 𝑅of the bead center (𝑠, 𝑠). We set bead (r)=0out-
side this region: the membrane is adherent to a flat substrate
outside of the bead region.
B. Energy of membrane height and density changes
In addition to the height of the membrane, we also character-
ize the membrane by the lipid densities in each leaflet. We use
the Seifert-Langer model [39,40] to represent how the mem-
branes height couples to lipid densities. Due to membrane
curvature, the lipid densities measured at different depths into
the membrane bilayer will differ. We follow Seifert and Langer
and primarily use the scaled lipid densities of the upper and
lower monolayers at the midsurface, 𝜌+and 𝜌. These are
defined as 𝜌±≡ (𝜓±/𝜙01), where 𝜓±are the densities pro-
jected onto the bilayer midsurface and 𝜙0is the equilibrium
number density of a flat membrane. With this definition, the
lipid density deviation between the upper and lower monolay-
ers at the midsurface is given by 𝜌≡ (𝜌+𝜌)/2, and the
average density is ¯𝜌≡ (𝜌++𝜌)/2. As shown in Fig. 3,
when the membrane is bent to a positive curvature and the
lipids allowed to laterally relax, the density projected by the
upper leaflet at the midsurface is greater than that projected
by the lower leaflet. (This is in contrast to the density profile
3
when momentarily bending the membrane, where the midsur-
face densities are equal and the upper and lower leaflets are
stretched and compressed at the neutral surface, respectively
[41].)
Neutral surface
Midsurface
Neutral
surface
FIG. 3. A curved membrane induces deviations in the packing of
lipids in the bilayer. When the membrane is flat, the number densi-
ties of lipids projected by the two monolayers at the midsurface are
equivalent. However, when the membrane is curved and its lipids are
allowed to laterally relax to their minimum energy value, the upper
(+) and lower () monolayers project different densities at the midsur-
face. The steeper the curvature, the greater the difference between the
scaled densities 𝜌+and 𝜌. At steady-state, the neutral surface lipid
number densities 𝜙+=𝜙. The distance between the midsurface and
either neutral surface is 𝑑.
The membranes total free energy 𝐸consists of the sum of
the Helfrich free energy due to bending the membrane [42], the
energy due to lipid density deviations of the upper and lower
membrane monolayers away from their ideal values, and the
adhesion energy in Eq. (1), such that
𝐸=dr𝜅
2(2𝐻)2+𝑘
2[(𝜌+2𝑑𝐻)2+(𝜌+2𝑑𝐻)2]+𝐸adh,
(2)
where 𝜅is the membrane bending modulus, 𝐻is the mean
curvature of the membrane, such that 2𝐻=−∇2(r), and 𝑘is
the monolayer area compressibility modulus. (𝜌+2𝑑𝐻)and
(𝜌+2𝑑𝐻)represent the deformations away from the ideal
lipid density in the upper and lower membrane monolayers,
respectively. 𝑑is the distance between the bilayer midsurface
and the neutral surfaces of the monolayers (for brevity, we
refer to 𝑑as the monolayer thickness). The sign conventions
used for the mean curvature 𝐻in Eq. (2) are as in [40]. Since
we do not model asymmetries in lipid composition, we neglect
spontaneous curvature in the curvature dependent contribution
to the membrane energy [43].
The membrane bending energy includes a term 2(r),
which can be more easily dealt with in Fourier space. We
choose our Fourier conventions as representing a finite system
size of dimensions 𝐿×𝐿, with the Fourier wave-vector q=
2𝜋
𝐿(𝑚, 𝑛)such that (𝑁1)/2≤ (𝑚, 𝑛) ≤ (𝑁1)/2for
𝑁×𝑁modes/lattice points, assuming 𝑁is odd. The Fourier
transform pair for the membranes height is then
q=𝐿2dr(r)𝑒𝑖q·r, ℎ(r)=1
𝐿2
q
q𝑒𝑖q·r,(3)
and similarly for the transform pairs 𝜌q, 𝜌(r)and ¯𝜌q,¯𝜌(r).
Additional comments on the treatment of variables in Fourier
space are included in Appendix A.
The total free energy 𝐸in Eq. (2) is computed by summing
the contributions due to each Fourier mode as
𝐸=1
𝐿2
q
1
2(q, 𝜌q,¯𝜌q)E
q
𝜌q
¯𝜌q
+𝐸adh,(4)
E=
˜𝜅𝑞42𝑘 𝑑𝑞20
2𝑘𝑑𝑞22𝑘0
0 0 2𝑘.(5)
In Eq. (5), 𝑞is the magnitude of the Fourier wavevector q,
and q, 𝜌q,¯𝜌qare the membrane height, lipid density deviation
and average density corresponding to a given mode. Here
˜𝜅=𝜅+2𝑑2𝑘is the renormalized bending modulus, which
describes the response of the membrane over short times when
lipids cannot laterally relax. A typical value of 𝜅is about 20
𝑘𝐵𝑇, although this can be a few times larger for particularly
stiff membranes. The strength of membrane substrate adhesion
𝛾can vary over orders of magnitude in different contexts. To
best model the experiments in [12,13], we use a fairly strong
𝛾1013 J/m4, unless otherwise stated. This is our estimate
of adhesion strengths of supported lipid bilayers (SLBs) on
glass substrates (see Discussion and Appendix G). The other
parameter values used in the model are included in Table I.
C. Dynamics and simulation of fluctuating membranes
A membrane that is deformed away from its equilibrium
state will relax over time. The dynamics of this process are
controlled by the viscosity of the fluid outside the membrane,
the membranes own viscosity, and the drag between the two
leaflets [39,41,44]. To these relaxation dynamics, we add
a stochastic term obeying a fluctuation-dissipation relation-
ship, which ensures that the system will evolve into thermal
equilibrium. The resulting stochastic dynamical equations for
evolving q,𝜌qand ¯𝜌qin time are (Appendix D)
𝜕
𝜕𝑡
q
𝜌q
¯𝜌q
=𝐿2
1
Ω𝜕𝐸/𝜕
q
1
Ω𝜌𝜕𝐸/𝜕𝜌
q
1
Ω¯𝜌𝜕𝐸/𝜕¯𝜌
q+
𝜉q
𝜁q
𝜒q,(6)
where Ω1=1/4𝜂𝑞,Ω𝜌1=𝑞2/(4𝑏+4𝜂𝑞 +2𝜇𝑞2), and
Ω¯𝜌1=𝑞2/(4𝜂𝑞 +2𝜇𝑞2). These Ω1values play the role of
hydrodynamic mobilities for a membrane with monolayer vis-
cosity 𝜇and intermonolayer friction 𝑏embedded in a fluid of
viscosity 𝜂, setting the time derivative of a field 𝜔in terms of
the force-like term 𝐿2𝜕𝐸/𝜕𝜔
q(this is the Fourier transform
of 𝛿𝐸/𝛿𝜔(r)in our convention). For instance, Ω1
=1/4𝜂𝑞
is the Oseen tensor relating the 𝑧-component force density on
the membrane to the membrane heights velocity, as used in
[45]. Thermal fluctuations are accounted for with the stochas-
tic terms 𝜉q, 𝜁qand 𝜒q(Appendix D). The deterministic com-
ponents in the equations for 𝜕q
𝜕𝑡 and 𝜕𝜌q
𝜕𝑡 are consistent with
the Seifert-Langer model, and we derive 𝜕¯𝜌q
𝜕𝑡 from the hydro-
dynamic equations in [39] while neglecting inertial effects.
4
While we present these equations of motion in terms of the
hydrodynamics of the system for generality, our focus is on
the equilibrium properties of the system, which are indepen-
dent of the dynamic parameters 𝜂,𝜇,𝑏, etc. We will use this
dynamical model to sample from the equilibrium thermal dis-
tributions of (r), 𝜌(r)and ¯𝜌(r). A full understanding of the
dynamics of this problem should also include the effect of the
presence of the substrate near to the surface, which will alter
the hydrodynamic response [44,46].
To simultaneously simulate the fluctuations of membrane
height and lipid density, we numerically integrate Eq. (6).
This essentially extends the Fourier-space Brownian Dynamics
(FSBD) approach [45]—so we will often refer to our simula-
tions as FSBD simulations as well. The simulation algorithms,
their derivations, and guidelines for choosing a manageable
timestep for simulation convergence are included in Appendix
D. To ensure that our approach creates the correct equilibrium
distribution, we compared with an extension of the Fourier
Monte Carlo method [47] (Appendix L).
D. Modeling a protein as a perfect observer
To understand what will limit a proteins ability to sense
membrane curvature even in ideal circumstances, we treat the
protein as a perfect observer, making a precise measurement
of the membrane curvature at the protein scale. The perfect
observer assumption means that the protein does not affect
the membrane in any way: it is a mere spectator. By a mea-
surement “at the protein scale,” we describe an average over a
region of the membrane of roughly the proteins size 𝑎. The
local membrane curvature and local lipid density deviation
sensed by the protein are then
𝐶𝑎=𝐿2dr𝐺(r, 𝑎)2(r)
2,(7)
𝜌𝑎=𝐿2dr𝐺(r, 𝑎)𝜌(r),(8)
where 𝐺(r, 𝑎)is a two-dimensional Gaussian weight centered
at the protein location, such that
𝐺(r, 𝑎)=1
2𝜋𝑎2exp |rrprot |2
2𝑎2.(9)
We will always choose the protein to be located at the top of
the spherical bead, rprot =(𝐿/2, 𝐿/2).
The integrals in Eqs. (7)–(8) are evaluated by summing
over discrete membrane lattice points. Membrane curvatures
are computed from qnoting that the Fourier transform of the
curvature is {1
22(r)}q=1
2𝑞2q, then using the inverse Fast
Fourier Transform to reconstruct the curvature field 1
22(r).
FIG. 4. Histograms (normalized to probability densities) from FSBD
simulations of local membrane curvatures and local lipid density
deviations sensed by a protein of size 𝑎=16 nm positioned at the top
of membrane-adhered beads of different diameters. The strength of
membrane-substrate adhesion is 𝛾=1013 J/m4. When the histogram
distributions associated to different beads overlap considerably, there
is more uncertainty about which bead curvature resulted in a particular
local membrane curvature or density deviation sensed by the protein.
The simulation used timesteps of Δ𝑡=3.2ns for total time 𝑡sim =
0.016 seconds. Simulation parameters: Table I.
III. RESULTS
A. Simulations of membrane-adhered beads
We simulate fluctuating membranes adhered to beads of
varying sizes. In Fig. 4, we show the distribution of local
curvature 𝐶𝑎and local lipid density deviation 𝜌𝑎that would
be sensed over a protein scale of 𝑎=16 nm such that 2𝑎
roughly corresponds to the footprint of a yeast septin rod,
which has an end-end length of 32 nm [11]. We have chosen
the membrane-substrate adhesion appropriate for a supported
lipid bilayer, which is strongly adherent (Appendix G). These
distributions show the extent to which different beads could
be distinguished by a protein: when there is significant over-
lap between two distributions, even a perfect detector would
struggle to distinguish between beads of these radii. As the
bead radius is increased, the average curvatures and density
deviations sensed by the protein decrease in magnitude—as
we would expect, because the bead is made locally flatter. The
distributions for larger beads overlap more substantially, so a
protein that measures a particular curvature or density value
in this regime is subjected to more ambiguity as to which bead
the measurement corresponds to.
5
B. Quantifying sensing efficacy with signal-to-noise ratio
If a particular local curvature or density deviation is sampled
from the distributions in Fig. 4, can the bead size correspond-
ing to the sampled measurement be reliably determined? This
can be challenging due to overlapping distributions, since each
bead size is associated to a multiplicity of instantaneous 𝐶𝑎
and 𝜌𝑎values. We summarize the way that thermal fluctua-
tions of the membrane could confound even a perfect detector
of curvature or lipid density in distinguishing between two
membrane-adhered beads of different sizes with a signal-to-
noise ratio (SNR), such that
SNR =(𝜇𝐴𝜇𝐵)2
𝜎2
𝐴+𝜎2
𝐵
,(10)
where 𝜇𝐴and 𝜇𝐵are the average membrane curvature or lipid
density deviation at steady-state for two beads 𝐴and 𝐵, and
𝜎2
𝐴and 𝜎2
𝐵are the corresponding variances of the membrane
curvature or density deviation sensed by the protein. The mo-
tivation for this definition is to measure the distance between
the means of two histograms in Fig. 4in terms of their vari-
ance. If we define a variable 𝑋which is the difference between
the measured variable on bead 𝐴and the measured variable
on bead 𝐵, the SNR is h𝑋i2/h𝑋2i−h𝑋i2—which gives Eq.
(10) because the variance of two independent variables adds.
The greater this SNR value is, the better a protein can dis-
tinguish between the two beads 𝐴and 𝐵in the presence of
thermal fluctuations of the membrane. We will show in Sec-
tion III E that—with some additional assumptions—this SNR
controls the largest possible ratio of association rates of pro-
teins to beads of radius 𝑅𝐴and 𝑅𝐵, and use this to estimate
experimental SNR.
We use our FSBD simulation to compute the SNR for pairs
of beads in Fig. 5, keeping the difference 𝑅𝐴𝑅𝐵to be
200 nm. The smaller the beads, the better a protein can dis-
tinguish between two similarly sized beads, as indicated by
the magnitude of the SNR. For beads on the micron-scale,
the SNR is much smaller than 1when the beads are similarly
sized (such as 1.2 𝜇m and 1.4 𝜇m diameters). This is true
for both the SNR of curvature sensing, SNR𝐶, and the SNR
of density sensing, SNR𝜌. The decrease in SNR is largely
driven by the decreasing signal: large beads have curvatures
1/𝑅that are both increasingly close to zero curvature, so the
term (𝜇𝐴𝜇𝐵)2will shrink. As we will see later (Fig. 8), for
beads where the radii differ significantly, e.g. 1micron vs. 3
micron diameters, the SNR can be appreciable. We also see
that changing the membrane-substrate adhesion energy from
a weakly-adherent membrane value (𝛾=1011 J/m4) to one
appropriate to a SLB (𝛾=1013 J/m4) increases the SNR.
To gain an understanding of how the SNR depends on the
protein size, the mechanical properties of the membrane, the
geometry of the bead, and the membrane-bead adhesion, we
develop a theoretical model for the SNR in the next section,
Sec. III C. We plot this theoretical result against the sim-
ulation result and see good agreement, especially at strong
membrane-substrate adhesion and large bead sizes (Fig. 5).
This deviation at small bead sizes (200 300 nm radii) and
weak adhesion (𝛾1011 J/m4) is expected. As we discuss in
the next section, our theoretical model assumes that on aver-
age, the fluctuating membrane perfectly follows the shape of
a spherical bead of any radius 𝑅. However, in the simulated
membrane-bead systems using hemispherical beads with small
𝑅, weak membrane adhesion cannot overcome the substantial
bending forces required at the sharp intersection between the
periphery of a small hemisphere and the horizontal plane from
which it is projected [49]. A stronger adhesion strength such
as 𝛾1013 J/m4rectifies this, and allows the membrane to
follow the shape of the bead nearly perfectly. In Appendix
E, we show a comparison of the cross-sectional profiles of a
simulated membrane adhered to a small bead for both weak
and strong adhesion.
C. Analytical calculation of the SNR
To find an analytical form for the SNR written in Eq. (10),
we need the average values of curvature and density deviation
on a bead as well as their standard deviations. The average
mean curvature and density deviation are reflected by the av-
erage shape of the membrane wrapping the bead, and we can
find analytical values for them.
If the membrane is strongly adherent to the bead, on average
its shape will just be the bead’s shape, h(r)i =bead (r). The
averaged mean curvature for a membrane adhered to a bead
is then 1
22bead (r). At the top of the bead (r=rprot), the
curvature is then
h𝐶𝑎i ≈ 1/𝑅, (11)
where 𝑅is the bead’s radius. Our assumption that the mem-
brane follows the shape of the bead can be checked with sim-
ulation: we see that it is reasonable at sufficiently large bead
sizes and strong membrane-substrate adhesion (refer to Fig.
13 in Appendix).
Given that the membrane is deformed to follow the bead, we
can find the value of 𝜌(r)that would minimize the energy of
the membrane, solving for 𝜌qsuch that 𝜕𝐸/𝜕 𝜌
q=0(using Eq.
(4)). This would be the steady-state 𝜌qholding the membrane
shape fixed. We find that this value is
𝜌ss
q=𝑑𝑞2q.(12)
Inverting the Fourier transform, we see that the density at the
proteins location is
𝜌ss (rprot)=𝑑2(rprot)=2𝑑
𝑅.(13)
To approximate the standard deviation of observed curvature
and density histograms, we start by noting that in Fig. 4,
the width of the histograms is broadly consistent across many
different bead diameters. This suggests that 𝜎𝐴and 𝜎𝐵do not
strongly depend on bead size. In fact, for a large enough bead,
the variances of the observed curvature are essentially those
for a membrane adherent on a flat substrate with the same
adhesion strength. This approximation is warranted for the
same reason that sensing micron-scale curvature is difficult:
摘要:

PhysicallimitstomembranecurvaturesensingbyasingleproteinIndrajitBadvaram1andBrianA.Camley2,11DepartmentofBiophysics,JohnsHopkinsUniversity,Baltimore,MD2WilliamH.MillerIIIDepartmentofPhysics&Astronomy,JohnsHopkinsUniversity,Baltimore,MDMembranecurvaturesensingisessentialforadiverserangeofbiologicalpr...

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Physical limits to membrane curvature sensing by a single protein Indrajit Badvaram1and Brian A. Camley21 1Department of Biophysics Johns Hopkins University Baltimore MD.pdf

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