High Resolution Spatio-Temporal Model for Room-Level Airborne Pandemic Spread Teddy Lazebnik1and Ariel Alexi2

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High Resolution Spatio-Temporal Model for Room-Level Airborne
Pandemic Spread
Teddy Lazebnik1and Ariel Alexi2
1Department of Cancer Biology, Cancer Institute, University College London, London, UK
2Department of Information Science, Bar-Ilan University, Ramat-Gan, Israel
October 10, 2022
Abstract
Airborne pandemics have caused millions of deaths worldwide, large-scale economic losses, and catas-
trophic sociological shifts in human history. Researchers have developed multiple mathematical models and
computational frameworks to investigate and predict the pandemic spread on various levels and scales such as
countries, cities, large social events, and even buildings. However, modeling attempts of airborne pandemic
dynamics on the smallest scale, a single room, have been mostly neglected. As time indoors increases due to
global urbanization processes, more infections occur in shared rooms. In this study, a high-resolution spatio-
temporal epidemiological model with air flow dynamics to evaluate airborne pandemic spread is proposed.
The model is implemented using a high resolution 3D data obtained using a light detection and ranging
(LiDAR) device and computing the model based on the Computational Fluid Dynamics (CFD) model for
the air flow and the Susceptible-Exposed-Infected (SEI) model for the epidemiological dynamics. The pan-
demic spread is evaluated in four types of rooms, showing significant differences even for a short exposure
duration. We show that the room’s topology and individual distribution in the room define the ability of air
ventilation to reduce pandemic spread throughout breathing zone infection. keywords: Agent-based sim-
ulation, Indoor pandemic, Airborne pathogens, Mask-wearing intervention policy, SEI model, Indoor CFD
simulation.
1 Introduction
Humanity suffered multiple pandemics during its history [1]. In just the last few hundred years, pandemics
caused significant mortality, economical crises, and political shifts [2]. For example, tens of millions of individuals
worldwide died due to the 1918 influenza pandemic [2]. Another example is the coronavirus (COVID-19)
These authors contributed equally.
Corresponding author: t.lazebnik@ucl.ac.uk
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arXiv:2210.03431v1 [cs.IR] 7 Oct 2022
pandemic which was declared by the World Health Organization (WHO) as a public health emergency of
international concern in 2020 and resulted in around six million deaths over the first two years [3, 4].
As such, policymakers are faced with the challenge of controlling a pandemic spread. In particular, this
challenge becoming increasingly more relevant, as urbanization grows in the developing world is bringing more
people into denser neighborhoods, which results in a higher infection rate, at which new diseases are spread
[5]. Indeed, Wu et al. (2017) have shown that the overall globalization processes taking place in the recent few
decades have facilitated pandemic spread [6]. These and other social and economic processes are predicted to
make the infectious disease outbreaks nearly constant in the near future [1].
Pandemics are taking many shapes such as sexual transmitted diseases (for example, HIV) [7, 8], social
influenced behavior (like, alcoholism) [9, 10], and airborne diseases (such as influenza) [11, 12]. The group
of airborne pandemics are including viruses such as the Lassa virus, Nipah virus or poxviruses, COVID-19,
influenza, and others. These are a cause for concern owing to their infection rate and potential for global spread
[13]. Consequently, pandemic intervention policies (PIPs) for airborne pandemics are known to be relatively
more harmful to the economy and psychological state of the population relative to other types of pandemic
[14, 15, 16, 17, 18].
Multiple models have been proposed to describe airborne pandemics [19, 20], mostly extending the Susceptible-
Infected-Recovered (SIR) model proposed by [21]. More often than not, these models are working well for large
population sizes and relatively long period of time, providing a fine prediction of the pandemic spread and the
influence of a wide range of PIPs on average. However, since these models are focusing on large populations
and usually large-scale spatial locations such as cities and countries, they provide less accurate predictions for
small size populations in small spatial locations which mainly left neglected.
In this work, we propose a high-resolution spatio-temporal epidemiological model for a case of a single room
with a small population. The model is inspired by the SIR model and takes into consideration three-dimensional
spatial dynamics with air flow. In particular, individuals are infected by breathing pathogen particles from the
air and infect others by breathing out pathogen particles. Using the proposed model, one is able to better
approximate the airborne pandemic spread in small populations located in a room. The novelty of the proposed
model lies in the integration of a computational fluid dynamics simulator for air flow with a spatio-temporal
epidemiological model and focusing on a small size population over a short duration.
The proposed model is evaluated for four types of rooms (classroom, conference room, movie theater, and
restaurants), reviling statistically different pandemic spread dynamics. In addition, the influence of the mask-
wearing and artificial air ventilation (AAV) PIPs are evaluated for each room type on a wide range of possible
configurations. The mask-wearing is shown to better reduce the pandemic spread compared to AAV for all
room types. We find that the distribution of individuals in the room has a major influence on the efficiency of
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AAV, mainly depending on the amount of breathing zone infections.
The paper is organized as follows. Section 2 outlines the current epidemiological and air movement models
and their simulations approaches. Section 3 introduces the proposed mathematical model with computer simu-
lation. Section 4 presents several simulations based on the proposed model. In Sections 5 and 6, we discuss the
results and offer future work.
2 Background
Multiple studies show that mathematical models and computer simulations are powerful tools for policymakers
to investigate pandemic spread and different PIPs with their outcomes in a fast, cheap, and controlled manner
[20, 19, 22]. There are multiple modeling approaches for epidemiological dynamics [23, 24, 25]. The leading
approach is extending the SIR model [21] with sociological [20], economic [26], biological [19], and clinical [27]
dynamics to name a few.
More often than not, these models obtain relatively poor results for medium and long prediction periods.
One explanation for this shortcoming is the assumption that the population is well mixed which known to be
false even for small population sizes and spatial locations [28, 29, 30, 31, 32, 33]. Indeed, Cooper et al. (2020)
used the SIR model on the COVID-19 pandemic while relaxing the assumption that the population is mixing
homogeneously, showing a fair fitting on six countries with improved results compared to the classical SIR model
[34]. In general, long time periods is hard to predict simply due to statistical fluctuations.
To tackle this challenge, several models introduced spatial dynamics to the spread of a pandemic which can be
divided into two main groups: graph-based and metric space. Graph-based models take an abstract approach
to modeling the locations in which individuals can be located at. Usually, it is assumed that each node in
the spatial graph represents a physical location (such as a room, street, city, or even a country) and that the
population is well-mixed in each node [22, 30]. This approach more often than not ignores the physical properties
and dynamics that occur in the location represented by the graph’s nodes. For instance, Lazebnik et al. (2021b)
proposed a two age-group extended SIR model with a three-node graph representing a school, a home, and a
work such that the individuals move between them according to their age group and time of the day [35]. Moore
and Newman (2000) study several models of disease transmission on small-world networks, in which either the
probability of infection by a disease or the probability of its transmission is varied, or both [36]. The authors
conducted a numerical analysis which results present a similar behavior to the reported data by [29]. Klovdahl et
al. (1994) defined and explored the stochastic SIR model on a graph of interactions to represent the pandemic in
a cattle trade network with epidemiological and demographic dynamics occurring over the same time scale [31].
The authors used real data on trade-related cattle movements from a densely populated livestock farming region
in western France and epidemiological parameters corresponding to an infectious epizootic disease, obtaining
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fair prediction accuracy. Additionally, Lazebnik and Alexi (2022) proposed a graph-based extended SIR model
where each node represents a room in a building [28]. The authors examined the influence of the different
moving patterns of the population in several building types (home, school, office, and mall) on the pandemic
spread and on the optimal configuration of both spatial and temporal such as mask-wearing and vaccination,
respectively. Nevertheless, the authors assumed that the population is well-mixed in each room. As a result,
their model produced noisy results for the case of the home-type building, where the population density is low.
On other hand, for the case of spatial models, it is assumed that the space is continuous and people move in
the space over time, representing a more physically accurate representation of movement. For instance, Milner
and Zhao (2008) proposed a SIR based model where susceptible individuals move away from the previous
location of the infection, and all individuals move away from overcrowded regions [37]. Fabricius and Maltz
(2020) developed a stochastic SIR model with global and local infective contacts [38]. Paeng and Lee (2017)
proposed a SIR based model where individuals are assumed to move stochastically within a small fixed radius
rather than a random walk [39]. The authors proposed continuous and discrete SIR based models that show
spatial distributions. They show that the propagation speed and size of an epidemic depend on the population
density and the infectious radius.
In the context of airborne pandemics, one can focus on the infection that occurs in a room by tracking the
air flow with the pathogen particles it carries between the individuals in the room [40]. Wei and Li (2016) review
the release, transport, and exposure of expiratory droplets because of respiratory activities in the context of a
pandemic indoor [41]. The authors concluded that droplets or droplet nuclei are transported by air flow, which
is sometimes affected by the human body plume. They suggested that the usage of a face mask, as well as room
air ventilation, can reduce the infection rate.
Air flow (or air movement) dynamics are vastly explored in multiple contexts such as healthcare [42], me-
chanics [43], agriculture [44], and epidemiology [40]. In particular, Peng et al. (2020) explored the pandemic
spread of the airborne COVID-19 pathogen in indoor settings using a combination of the box and Wells-Riley
models [45, 46]. The authors have derived an expression for the number of secondary infections. Nonetheless,
their model is not taking into consideration a detailed, and accurate representation of the room’s geometry.
Moreover, the box model used by the authors does not correctly represent common cases such as rooms where
clear directional flow or infection due to overlapping breathing zones. In this work, we aim to tackle these
challenges using more detailed air flow dynamics.
There are various modeling approaches to predict the air flow within buildings such as Multi-zone models
and Zonal models. However, Computational Fluid Dynamics (CFD) models considered to be the most accurate
for a single room [47, 48].
The CFD models are numerical methods of solving fluid flow using the Navier-Stokes (NS) equations [49].
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These models use numerical algorithms to integrate the NS equations over a given mesh by converting the integral
equations to algebraic equations (e.g., discretization) and then solving them iteratively [50]. In the context of
building air flow or even room-level air flow, the CFD modeling approach subdivides an individual room into
many space segments and each one is treated as an atomic segment in which the NS equations are computed
[47]. There are three main types of CFD implementation for indoor air flow dynamics: Reynolds-Averaged
Navier-Stokes (RANS), Large Eddy Simulation (LES), and Direct Numerical Simulation (DNS) [51].
The RANS equations take advantage of the Reynolds decomposition technique whereby an instantaneous
quantity is decomposed into fluctuating quantities and the average value of some time duration. This technique
provides approximations over time of the NS equations, averaging the results on short periods [52]. Comple-
mentary, DNS numerically solves full Navier–Stokes equations using a very fine mesh to capture all the scales
that are present in a given flow. Interrelate, LES computes large-scale motions similarly to DNS but with a
larger grid, and sub-grid scale dynamics are solved using an averaging method such as the RANS approach.
While all three CFD computational approaches are able to provide accurate predictions for air flow, the RANS
approach is the most popular one for the indoor environment. This is because the other two CFD approaches
are significantly more computationally expensive without a justified improvement in prediction accuracy for
most cases [53].
Several CFD-based models and simulators have been developed for indoor context [54, 55, 56]. Hiyama and
Kato [54] developed a 3D CFD model for close space with air flow in whole building settings. The authors
integrated the outcomes of the CFD simulation with building energy simulations to achieve a more accurate
time-series analysis of building energy consumption compared to conventional energy simulations [54]. Nahor
et al. [55] proposed a 3D CFD model to calculate the velocity, temperature, and moisture distribution in an
existing empty and loaded cool store. The authors validated their model with data from several experiments
and show that the model was capable of predicting both the air and product temperature with reasonable
accuracy [55]. Smale et al. [56] reviewed the application of CFD and other numerical modeling techniques
to the prediction of air flow in refrigerated food applications including cool stores, transport equipment, and
retail display cabinets. The authors show that given enough computation power, CFD-based models obtain
high accuracy in all these tasks. For the case of an individual breathing in a room, Cravero and Marsano shown
that the CFD model provides a fine accuracy to the air movement including breathing dynamics, air ventilation,
and air diffusion [57]. Thusly, CFD-based models are accurately describing the air movement dynamics across
a wide range of environments in general and room types in particular. As such, the CFD model implemented
using the RANS method is used in this research.
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摘要:

HighResolutionSpatio-TemporalModelforRoom-LevelAirbornePandemicSpreadTeddyLazebnik*„1andArielAlexi21DepartmentofCancerBiology,CancerInstitute,UniversityCollegeLondon,London,UK2DepartmentofInformationScience,Bar-IlanUniversity,Ramat-Gan,IsraelOctober10,2022AbstractAirbornepandemicshavecausedmillions...

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